Recent Publications

Profiling the complex rearrangement architecture of sarcoma
S Waise, T Lesluyes, J Demeulemeester, M Tarabichi, AM Flanagan, N Pillay, P Van Loo. Journal of Pathology 2024/8/1

Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction
Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle MG Espiritu, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, Ignaty Leshchiner, Dimitris Anastassiou, Yuanfang Guan, Gun Ho Jang, Mohammed FE Mootor, Kerstin Haase, Amit G Deshwar, William Zou, Imaad Umar, Stefan Dentro, Jeff A Wintersinger, Kami Chiotti, Jonas Demeulemeester, Clemency Jolly, Lesia Sycza, Minjeong Ko, David C Wedge, Quaid D Morris, Kyle Ellrott, Peter Van Loo, Paul C Boutros. Nature Biotechnology 2024/6/11 https://www.nature.com/articles/s41587-024-02250-y

Genomic evolution shapes prostate cancer disease type
Dan J Woodcock, Atef Sahli, Ruxandra Teslo, Vinayak Bhandari, Andreas J Gruber, Aleksandra Ziubroniewicz, Gunes Gundem, Yaobo Xu, Adam Butler, Ezequiel Anokian, Bernard J Pope, Chol-Hee Jung, Maxime Tarabichi, Stefan C Dentro, J Henry R Farmery, Peter Van Loo, Anne Y Warren, Vincent Gnanapragasam, Freddie C Hamdy, G Steven Bova, Christopher S Foster, David E Neal, Yong-Jie Lu, Zsofia Kote-Jarai, Michael Fraser, Robert G Bristow, Paul C Boutros, Anthony J Costello, Niall M Corcoran, Christopher M Hovens, Charlie E Massie, Andy G Lynch, Daniel S Brewer, Rosalind A Eeles, Colin S Cooper, David C Wedge. Cell Genomics 2024/3/13 https://www.cell.com/cell-genomics/fulltext/S2666-979X(24)00038-7

Aneuploidy and complex genomic rearrangements in cancer evolution
Toby M Baker, Sara Waise, Maxime Tarabichi, Peter Van Loo. Nature cancer 2024/2. https://www.nature.com/articles/s43018-023-00711-y

Pan-cancer subclonal mutation analysis of 7,827 tumors predicts clinical outcome
Yujie Jiang, Matthew D Montierth, Kaixian Yu, Shuangxi Ji, Shuai Guo, Quang Tran, Xiaoqian Liu, Seung Jun Shin, Shaolong Cao, Ruonan Li, Yuxin Tang, Tom Lesluyes, Scott Kopetz, Jaffer Ajani, Pavlos Msaouel, Sumit K Subudhi, Ana Aparicio, Padmanee Sharma, John Paul Shen, Anil K Sood, Maxime Tarabichi, Jennifer R Wang, Marek Kimmel, Peter Van Loo, Hongtu Zhu, Wenyi Wang. bioRxiv 2024.07. 03.601939 https://www.biorxiv.org/content/10.1101/2024.07.03.601939v1.abstract